IL_7ASO_030
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASO_030 not in the Motif Atlas
- Geometric match to IL_4WF9_001
- Geometric discrepancy: 0.107
- The information below is about IL_4WF9_001
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_22311.1
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
7ASO|1|Y|G|24
7ASO|1|Y|U|25
7ASO|1|Y|G|26
7ASO|1|Y|G|27
7ASO|1|Y|A|28
7ASO|1|Y|U|29
7ASO|1|Y|G|30
*
7ASO|1|Y|C|555
7ASO|1|Y|U|556
7ASO|1|Y|G|557
7ASO|1|Y|A|558
7ASO|1|Y|A|559
7ASO|1|Y|A|560
7ASO|1|Y|C|561
Current chains
- Chain Y
- 23S
Nearby chains
- Chain S
- 50S ribosomal protein L20
- Chain V
- 50S ribosomal protein L22
- Chain g
- 50S ribosomalprotein L32p
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