IL_7ASO_035
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- GAGAACUG*CUUAGUACC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASO_035 not in the Motif Atlas
- Homologous match to IL_4WF9_008
- Geometric discrepancy: 0.1096
- The information below is about IL_4WF9_008
- Detailed Annotation
- 9x8 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_84694.2
- Basepair signature
- cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7ASO|1|Y|G|190
7ASO|1|Y|A|191
7ASO|1|Y|G|192
7ASO|1|Y|A|193
7ASO|1|Y|A|194
7ASO|1|Y|C|195
7ASO|1|Y|U|196
7ASO|1|Y|G|197
*
7ASO|1|Y|C|204
7ASO|1|Y|U|205
7ASO|1|Y|U|206
7ASO|1|Y|A|207
7ASO|1|Y|G|208
7ASO|1|Y|U|209
7ASO|1|Y|A|210
7ASO|1|Y|C|211
7ASO|1|Y|C|212
Current chains
- Chain Y
- 23S
Nearby chains
- Chain O
- 50S ribosomal protein L15
- Chain c
- 50S ribosomal protein L28
- Chain i
- 50S ribosomal protein L34
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