IL_7ASO_060
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- GGAAAAG*CGAAAAUGUACCGGGGC
- Length
- 24 nucleotides
- Bulged bases
- 7ASO|1|Y|A|1070, 7ASO|1|Y|A|1171, 7ASO|1|Y|U|1174, 7ASO|1|Y|C|1178
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASO_060 not in the Motif Atlas
- Geometric match to IL_4WF9_040
- Geometric discrepancy: 0.2125
- The information below is about IL_4WF9_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50715.3
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
7ASO|1|Y|G|1068
7ASO|1|Y|G|1069
7ASO|1|Y|A|1070
7ASO|1|Y|A|1071
7ASO|1|Y|A|1072
7ASO|1|Y|A|1073
7ASO|1|Y|G|1074
*
7ASO|1|Y|C|1168
7ASO|1|Y|G|1169
7ASO|1|Y|A|1170
7ASO|1|Y|A|1171
7ASO|1|Y|A|1172
7ASO|1|Y|A|1173
7ASO|1|Y|U|1174
7ASO|1|Y|G|1175
7ASO|1|Y|U|1176
7ASO|1|Y|A|1177
7ASO|1|Y|C|1178
7ASO|1|Y|C|1179
7ASO|1|Y|G|1180
7ASO|1|Y|G|1181
7ASO|1|Y|G|1182
7ASO|1|Y|G|1183
7ASO|1|Y|C|1184
Current chains
- Chain Y
- 23S
Nearby chains
- Chain M
- 50S ribosomal protein L13
- Chain P
- 50S ribosomal protein L16
- Chain e
- 50S ribosomal protein L3
- Chain k
- 50S ribosomal protein L36
Coloring options: