IL_7ASO_061

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

GAUG*CGC

Length

7 nucleotides

Bulged bases

7ASO|1|Y|U|1077

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASO_061 not in the Motif Atlas

Homologous match to IL_4WF9_041

Geometric discrepancy: 0.2115

The information below is about IL_4WF9_041

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_57744.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

22

Unit IDs

7ASO|1|Y|G|1075
7ASO|1|Y|A|1076
7ASO|1|Y|U|1077
7ASO|1|Y|G|1078
*
7ASO|1|Y|C|1165
7ASO|1|Y|G|1166
7ASO|1|Y|C|1167

Current chains

Chain Y

23S

Nearby chains

Chain P

50S ribosomal protein L16

Chain k

50S ribosomal protein L36