IL_7ASO_074

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

ACUCGG*CUGU

Length

10 nucleotides

Bulged bases

7ASO|1|Y|G|2019

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASO_074 not in the Motif Atlas

Homologous match to IL_4WF9_065

Geometric discrepancy: 0.1389

The information below is about IL_4WF9_065

Detailed Annotation

Intercalated tWH

Broad Annotation

Intercalated tWH

Motif group

IL_76758.2

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

7

Unit IDs

7ASO|1|Y|A|1713
7ASO|1|Y|C|1714
7ASO|1|Y|U|1715
7ASO|1|Y|C|1716
7ASO|1|Y|G|1717
7ASO|1|Y|G|1718
*
7ASO|1|Y|C|2017
7ASO|1|Y|U|2018
7ASO|1|Y|G|2019
7ASO|1|Y|U|2020

Current chains

Chain Y

23S

Nearby chains

Chain N

50S ribosomal protein L14

Chain e

50S ribosomal protein L3