IL_7ASO_106
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- UUGAG*CAAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASO_106 not in the Motif Atlas
- Homologous match to IL_4WF9_099
- Geometric discrepancy: 0.1201
- The information below is about IL_4WF9_099
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.3
- Basepair signature
- cWW-tSH-tHW-tHS-cSH-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
7ASO|1|Y|U|2663
7ASO|1|Y|U|2664
7ASO|1|Y|G|2665
7ASO|1|Y|A|2666
7ASO|1|Y|G|2667
*
7ASO|1|Y|C|2801
7ASO|1|Y|A|2802
7ASO|1|Y|A|2803
7ASO|1|Y|G|2804
7ASO|1|Y|A|2805
7ASO|1|Y|U|2806
7ASO|1|Y|G|2807
7ASO|1|Y|A|2808
7ASO|1|Y|G|2809
Current chains
- Chain Y
- 23S
Nearby chains
- Chain M
- 50S ribosomal protein L13
- Chain e
- 50S ribosomal protein L3
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