IL_7ASO_127

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

CCC*GGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7ASO_127 not in the Motif Atlas

Geometric match to IL_8C3A_070

Geometric discrepancy: 0.2189

The information below is about IL_8C3A_070

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15698.1

Basepair signature

cWW-tSH-cSH-cWW

Number of instances in this motif group

9

Unit IDs

7ASO|1|Y|C|186
7ASO|1|Y|C|187
7ASO|1|Y|C|188
*
7ASO|1|Y|G|214
7ASO|1|Y|G|215
7ASO|1|Y|A|216
7ASO|1|Y|G|217

Current chains

Chain Y

23S

Nearby chains

Chain i

50S ribosomal protein L34