IL_7ASP_046
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- UUUG*UUGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASP_046 not in the Motif Atlas
- Geometric match to IL_5EW4_002
- Geometric discrepancy: 0.2332
- The information below is about IL_5EW4_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
7ASP|1|Y|U|637
7ASP|1|Y|U|638
7ASP|1|Y|U|639
7ASP|1|Y|G|640
*
7ASP|1|Y|U|705
7ASP|1|Y|U|706
7ASP|1|Y|G|707
7ASP|1|Y|G|708
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L35
- Chain E
- 50S ribosomal protein L4
- Chain J
- 50S ribosomal protein L15
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