IL_7ASP_081
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CGUAAC*GGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 7ASP|1|Y|G|1743
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7ASP_081 not in the Motif Atlas
- Homologous match to IL_7A0S_063
- Geometric discrepancy: 0.1163
- The information below is about IL_7A0S_063
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_20700.1
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 10
Unit IDs
7ASP|1|Y|C|1730
7ASP|1|Y|G|1731
7ASP|1|Y|U|1732
7ASP|1|Y|A|1733
7ASP|1|Y|A|1734
7ASP|1|Y|C|1735
*
7ASP|1|Y|G|1740
7ASP|1|Y|G|1741
7ASP|1|Y|A|1742
7ASP|1|Y|G|1743
7ASP|1|Y|A|1744
7ASP|1|Y|A|1745
7ASP|1|Y|G|1746
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain X
- Small subunit ribosomal RNA; SSU rRNA
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