IL_7AZO_011
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CAUCAG*CGACGACG
- Length
- 14 nucleotides
- Bulged bases
- 7AZO|1|16SA|U|885, 7AZO|1|16SA|C|921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_011 not in the Motif Atlas
- Homologous match to IL_4LFB_011
- Geometric discrepancy: 0.0695
- The information below is about IL_4LFB_011
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_46174.3
- Basepair signature
- cWW-cSS-tSS-tSH-L-cWW-tHW-cWW
- Number of instances in this motif group
- 5
Unit IDs
7AZO|1|16SA|C|883
7AZO|1|16SA|A|884
7AZO|1|16SA|U|885
7AZO|1|16SA|C|886
7AZO|1|16SA|A|887
7AZO|1|16SA|G|888
*
7AZO|1|16SA|C|918
7AZO|1|16SA|G|919
7AZO|1|16SA|A|920
7AZO|1|16SA|C|921
7AZO|1|16SA|G|922
7AZO|1|16SA|A|923
7AZO|1|16SA|C|924
7AZO|1|16SA|G|925
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain S12A
- 30S ribosomal protein S12
- Chain S17A
- 30S ribosomal protein S17
Coloring options: