IL_7AZO_021
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- G(PSU)GCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 7AZO|1|16SA|A|1161, 7AZO|1|16SA|U|1163
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_021 not in the Motif Atlas
- Homologous match to IL_4LFB_021
- Geometric discrepancy: 0.1365
- The information below is about IL_4LFB_021
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.4
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7AZO|1|16SA|G|1144
7AZO|1|16SA|PSU|1145
7AZO|1|16SA|G|1146
7AZO|1|16SA|C|1147
7AZO|1|16SA|C|1148
7AZO|1|16SA|A|1149
7AZO|1|16SA|G|1150
*
7AZO|1|16SA|C|1157
7AZO|1|16SA|G|1158
7AZO|1|16SA|G|1159
7AZO|1|16SA|U|1160
7AZO|1|16SA|A|1161
7AZO|1|16SA|A|1162
7AZO|1|16SA|U|1163
7AZO|1|16SA|A|1164
7AZO|1|16SA|C|1165
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain ASIA
- Transfer RNA; tRNA
- Chain MRNA
- RNA (30-MER)
- Chain S12A
- 30S ribosomal protein S12
- Chain S3A
- 30S ribosomal protein S3
- Chain S4A
- 30S ribosomal protein S4
Coloring options: