IL_7AZO_023
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UGUAG*UGAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_023 not in the Motif Atlas
- Homologous match to IL_4LFB_023
- Geometric discrepancy: 0.1
- The information below is about IL_4LFB_023
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
7AZO|1|16SA|U|1209
7AZO|1|16SA|G|1210
7AZO|1|16SA|U|1211
7AZO|1|16SA|A|1212
7AZO|1|16SA|G|1213
*
7AZO|1|16SA|U|1386
7AZO|1|16SA|G|1387
7AZO|1|16SA|A|1388
7AZO|1|16SA|G|1389
7AZO|1|16SA|G|1390
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain 23SA
- Large subunit ribosomal RNA; LSU rRNA
- Chain S12A
- 30S ribosomal protein S12
- Chain S15A
- 30S ribosomal protein S15
- Chain S17A
- 30S ribosomal protein S17
- Chain S8A
- 30S ribosomal protein S8
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