IL_7AZO_034
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GGAGUACG*UGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_034 not in the Motif Atlas
- Homologous match to IL_4LFB_034
- Geometric discrepancy: 0.078
- The information below is about IL_4LFB_034
- Detailed Annotation
- 8x6 Sarcin-Ricin with inserted Y; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_84044.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
7AZO|1|16SA|G|1510
7AZO|1|16SA|G|1511
7AZO|1|16SA|A|1512
7AZO|1|16SA|G|1513
7AZO|1|16SA|U|1514
7AZO|1|16SA|A|1515
7AZO|1|16SA|C|1516
7AZO|1|16SA|G|1517
*
7AZO|1|16SA|U|1528
7AZO|1|16SA|G|1529
7AZO|1|16SA|A|1530
7AZO|1|16SA|A|1531
7AZO|1|16SA|A|1532
7AZO|1|16SA|C|1533
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain S12A
- 30S ribosomal protein S12
- Chain S17A
- 30S ribosomal protein S17
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