IL_7AZO_049

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GAUG*CUAAUC

Length

10 nucleotides

Bulged bases

7AZO|1|16SA|U|1884, 7AZO|1|16SA|A|1907

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_049 not in the Motif Atlas

Homologous match to IL_4LFB_052

Geometric discrepancy: 0.122

The information below is about IL_4LFB_052

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_11344.2

Basepair signature

cWW-cSS-L-cWW

Number of instances in this motif group

2

Unit IDs

7AZO|1|16SA|G|1882
7AZO|1|16SA|A|1883
7AZO|1|16SA|U|1884
7AZO|1|16SA|G|1885
*
7AZO|1|16SA|C|1904
7AZO|1|16SA|U|1905
7AZO|1|16SA|A|1906
7AZO|1|16SA|A|1907
7AZO|1|16SA|U|1908
7AZO|1|16SA|C|1909

Current chains

Chain 16SA

16S rRNA

Nearby chains

Chain S10A

30S ribosomal protein S10

Chain S14A

30S ribosomal protein S14 type Z

Chain S3A

30S ribosomal protein S3