IL_7AZO_072

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UAGU*AG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_072 not in the Motif Atlas

Homologous match to IL_5J7L_015

Geometric discrepancy: 0.1798

The information below is about IL_5J7L_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47074.2

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

4

Unit IDs

7AZO|1|16SB|U|890
7AZO|1|16SB|A|891
7AZO|1|16SB|G|892
7AZO|1|16SB|U|893
*
7AZO|1|16SB|A|915
7AZO|1|16SB|G|916

Current chains

Chain 16SB

16S rRNA

Nearby chains

Chain S17B

30S ribosomal protein S17