IL_7AZO_097
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GCA*UUCCC
- Length
- 8 nucleotides
- Bulged bases
- 7AZO|1|16SB|C|1557
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_097 not in the Motif Atlas
- Homologous match to IL_5J7L_041
- Geometric discrepancy: 0.1265
- The information below is about IL_5J7L_041
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_47078.3
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
7AZO|1|16SB|G|1556
7AZO|1|16SB|C|1557
7AZO|1|16SB|A|1558
*
7AZO|1|16SB|U|2008
7AZO|1|16SB|U|2009
7AZO|1|16SB|C|2010
7AZO|1|16SB|C|2011
7AZO|1|16SB|C|2012
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain ESIB
- Transfer RNA; tRNA
- Chain MRNB
- RNA (30-MER)
- Chain PSIB
- Transfer RNA; tRNA
- Chain S7B
- 30S ribosomal protein S7
- Chain S9B
- 30S ribosomal protein S9
Coloring options: