IL_7AZO_131

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGAAU*AUAG

Length

9 nucleotides

Bulged bases

7AZO|1|23SA|A|308

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_131 not in the Motif Atlas

Geometric match to IL_7RQB_011

Geometric discrepancy: 0.1509

The information below is about IL_7RQB_011

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7AZO|1|23SA|C|305
7AZO|1|23SA|G|306
7AZO|1|23SA|A|307
7AZO|1|23SA|A|308
7AZO|1|23SA|U|309
*
7AZO|1|23SA|A|382
7AZO|1|23SA|U|383
7AZO|1|23SA|A|384
7AZO|1|23SA|G|385

Current chains

Chain 23SA

23S rRNA

Nearby chains