IL_7AZO_158
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GGUAAAG*CGAAAAUGAUCGGGGC
- Length
- 23 nucleotides
- Bulged bases
- 7AZO|1|23SA|U|1074, 7AZO|1|23SA|A|1175, 7AZO|1|23SA|U|1178
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_158 not in the Motif Atlas
- Geometric match to IL_7RQB_040
- Geometric discrepancy: 0.0753
- The information below is about IL_7RQB_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50715.1
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
7AZO|1|23SA|G|1072
7AZO|1|23SA|G|1073
7AZO|1|23SA|U|1074
7AZO|1|23SA|A|1075
7AZO|1|23SA|A|1076
7AZO|1|23SA|A|1077
7AZO|1|23SA|G|1078
*
7AZO|1|23SA|C|1172
7AZO|1|23SA|G|1173
7AZO|1|23SA|A|1174
7AZO|1|23SA|A|1175
7AZO|1|23SA|A|1176
7AZO|1|23SA|A|1177
7AZO|1|23SA|U|1178
7AZO|1|23SA|G|1179
7AZO|1|23SA|A|1180
7AZO|1|23SA|U|1181
7AZO|1|23SA|C|1183
7AZO|1|23SA|G|1184
7AZO|1|23SA|G|1185
7AZO|1|23SA|G|1186
7AZO|1|23SA|G|1187
7AZO|1|23SA|C|1188
Current chains
- Chain 23SA
- 23S rRNA
Nearby chains
- Chain 5SA
- 5S ribosomal RNA; 5S rRNA
- Chain L13A
- 50S ribosomal protein L13
- Chain L16A
- 50S ribosomal protein L16
- Chain L3A
- 50S ribosomal protein L3
Coloring options: