IL_7AZO_169

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUAAG*CGAAG

Length

10 nucleotides

Bulged bases

7AZO|1|23SA|A|1428

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_169 not in the Motif Atlas

Geometric match to IL_7RQB_052

Geometric discrepancy: 0.0499

The information below is about IL_7RQB_052

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

7AZO|1|23SA|C|1400
7AZO|1|23SA|U|1401
7AZO|1|23SA|A|1402
7AZO|1|23SA|A|1403
7AZO|1|23SA|G|1404
*
7AZO|1|23SA|C|1425
7AZO|1|23SA|G|1426
7AZO|1|23SA|A|1427
7AZO|1|23SA|A|1428
7AZO|1|23SA|G|1429

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L2A

50S ribosomal protein L2

Chain L34A

50S ribosomal protein L34