IL_7AZO_171

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UG*CACAA

Length

7 nucleotides

Bulged bases

7AZO|1|23SA|C|1634

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_171 not in the Motif Atlas

Geometric match to IL_7RQB_054

Geometric discrepancy: 0.2447

The information below is about IL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_67474.4

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

7AZO|1|23SA|U|1464
7AZO|1|23SA|G|1465
*
7AZO|1|23SA|C|1632
7AZO|1|23SA|A|1633
7AZO|1|23SA|C|1634
7AZO|1|23SA|A|1635
7AZO|1|23SA|A|1636

Current chains

Chain 23SA

23S rRNA

Nearby chains