IL_7AZO_172

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGAUG*CUAAG

Length

10 nucleotides

Bulged bases

7AZO|1|23SA|U|1469

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_172 not in the Motif Atlas

Geometric match to IL_7RQB_055

Geometric discrepancy: 0.1184

The information below is about IL_7RQB_055

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

7AZO|1|23SA|C|1466
7AZO|1|23SA|G|1467
7AZO|1|23SA|A|1468
7AZO|1|23SA|U|1469
7AZO|1|23SA|G|1470
*
7AZO|1|23SA|C|1627
7AZO|1|23SA|U|1628
7AZO|1|23SA|A|1629
7AZO|1|23SA|A|1630
7AZO|1|23SA|G|1631

Current chains

Chain 23SA

23S rRNA

Nearby chains