IL_7AZO_180

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GGAAG*UGACAAC

Length

12 nucleotides

Bulged bases

7AZO|1|23SA|C|1593

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_180 not in the Motif Atlas

Geometric match to IL_7RQB_063

Geometric discrepancy: 0.1771

The information below is about IL_7RQB_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02656.1

Basepair signature

cWW-L-R-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

7AZO|1|23SA|G|1575
7AZO|1|23SA|G|1576
7AZO|1|23SA|A|1577
7AZO|1|23SA|A|1578
7AZO|1|23SA|G|1579
*
7AZO|1|23SA|U|1590
7AZO|1|23SA|G|1591
7AZO|1|23SA|A|1592
7AZO|1|23SA|C|1593
7AZO|1|23SA|A|1594
7AZO|1|23SA|A|1595
7AZO|1|23SA|C|1596

Current chains

Chain 23SA

23S rRNA

Nearby chains