IL_7AZO_204

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUC*GGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_204 not in the Motif Atlas

Geometric match to IL_4KNQ_003

Geometric discrepancy: 0.1424

The information below is about IL_4KNQ_003

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

7AZO|1|23SA|C|2227
7AZO|1|23SA|U|2228
7AZO|1|23SA|C|2229
*
7AZO|1|23SA|G|2234
7AZO|1|23SA|G|2235
7AZO|1|23SA|G|2236

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L28A

50S ribosomal protein L28

Chain L2A

50S ribosomal protein L2

Chain L9A

50S ribosomal protein L9