IL_7AZO_240
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GAAC*GAGUGAAAUAGAGC
- Length
- 18 nucleotides
- Bulged bases
- 7AZO|1|23SB|U|531, 7AZO|1|23SB|G|535
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_240 not in the Motif Atlas
- Geometric match to IL_7RQB_014
- Geometric discrepancy: 0.0785
- The information below is about IL_7RQB_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60992.6
- Basepair signature
- cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L
- Number of instances in this motif group
- 6
Unit IDs
7AZO|1|23SB|G|509
7AZO|1|23SB|A|510
7AZO|1|23SB|A|511
7AZO|1|23SB|C|512
*
7AZO|1|23SB|G|523
7AZO|1|23SB|A|524
7AZO|1|23SB|G|525
7AZO|1|23SB|U|526
7AZO|1|23SB|G|527
7AZO|1|23SB|A|528
7AZO|1|23SB|A|529
7AZO|1|23SB|A|530
7AZO|1|23SB|U|531
7AZO|1|23SB|A|532
7AZO|1|23SB|G|533
7AZO|1|23SB|A|534
7AZO|1|23SB|G|535
7AZO|1|23SB|C|536
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L22B
- 50S ribosomal protein L22
- Chain L24B
- 50S ribosomal protein L24
Coloring options: