IL_7AZO_269
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGAUGAAG*UGGAG
- Length
- 13 nucleotides
- Bulged bases
- 7AZO|1|23SB|U|1259
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_269 not in the Motif Atlas
- Geometric match to IL_7RQB_047
- Geometric discrepancy: 0.1041
- The information below is about IL_7RQB_047
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_70923.2
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 28
Unit IDs
7AZO|1|23SB|C|1256
7AZO|1|23SB|G|1257
7AZO|1|23SB|A|1258
7AZO|1|23SB|U|1259
7AZO|1|23SB|G|1260
7AZO|1|23SB|A|1261
7AZO|1|23SB|A|1262
7AZO|1|23SB|G|1263
*
7AZO|1|23SB|U|1283
7AZO|1|23SB|G|1284
7AZO|1|23SB|G|1285
7AZO|1|23SB|A|1286
7AZO|1|23SB|G|1287
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L20B
- 50S ribosomal protein L20
Coloring options: