IL_7AZO_275
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UGAAG*CGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_275 not in the Motif Atlas
- Geometric match to IL_7RQB_053
- Geometric discrepancy: 0.1371
- The information below is about IL_7RQB_053
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.1
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 24
Unit IDs
7AZO|1|23SB|U|1406
7AZO|1|23SB|G|1407
7AZO|1|23SB|A|1408
7AZO|1|23SB|A|1409
7AZO|1|23SB|G|1410
*
7AZO|1|23SB|C|1419
7AZO|1|23SB|G|1420
7AZO|1|23SB|U|1421
7AZO|1|23SB|A|1422
7AZO|1|23SB|G|1423
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L28B
- 50S ribosomal protein L28
- Chain L2B
- 50S ribosomal protein L2
- Chain L34B
- 50S ribosomal protein L34
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