IL_7AZO_279

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUAG*CGAAG

Length

9 nucleotides

Bulged bases

7AZO|1|23SB|A|1604

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_279 not in the Motif Atlas

Geometric match to IL_7RQB_057

Geometric discrepancy: 0.0691

The information below is about IL_7RQB_057

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7AZO|1|23SB|C|1486
7AZO|1|23SB|U|1487
7AZO|1|23SB|A|1488
7AZO|1|23SB|G|1489
*
7AZO|1|23SB|C|1601
7AZO|1|23SB|G|1602
7AZO|1|23SB|A|1603
7AZO|1|23SB|A|1604
7AZO|1|23SB|G|1605

Current chains

Chain 23SB

23S rRNA

Nearby chains