IL_7AZO_283

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UG*CAACAAG

Length

9 nucleotides

Bulged bases

7AZO|1|23SB|C|1558

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_283 not in the Motif Atlas

Geometric match to IL_7RQB_061

Geometric discrepancy: 0.3725

The information below is about IL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52493.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

7AZO|1|23SB|U|1531
7AZO|1|23SB|G|1532
*
7AZO|1|23SB|C|1555
7AZO|1|23SB|A|1556
7AZO|1|23SB|A|1557
7AZO|1|23SB|C|1558
7AZO|1|23SB|A|1559
7AZO|1|23SB|A|1560
7AZO|1|23SB|G|1561

Current chains

Chain 23SB

23S rRNA

Nearby chains