IL_7AZO_345
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GGAAU*GGAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZO_345 not in the Motif Atlas
- Homologous match to IL_5J7L_361
- Geometric discrepancy: 0.0844
- The information below is about IL_5J7L_361
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
7AZO|1|16SA|G|1302
7AZO|1|16SA|G|1303
7AZO|1|16SA|A|1304
7AZO|1|16SA|A|1305
7AZO|1|16SA|U|1306
*
7AZO|1|16SA|G|1342
7AZO|1|16SA|G|1343
7AZO|1|16SA|A|1344
7AZO|1|16SA|A|1345
7AZO|1|16SA|C|1346
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain L2A
- 50S ribosomal protein L2
- Chain S11A
- 30S ribosomal protein S11
- Chain S18A
- 30S ribosomal protein S18
- Chain S6A
- 30S ribosomal protein S6
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