IL_7AZO_363

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGCUGAC*GGUGGAG

Length

14 nucleotides

Bulged bases

7AZO|1|23SB|G|979

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZO_363 not in the Motif Atlas

Homologous match to IL_9DFE_024

Geometric discrepancy: 0.1524

The information below is about IL_9DFE_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68243.1

Basepair signature

cWW-L-cWW-cWW-R-L-tHS-cWW

Number of instances in this motif group

1

Unit IDs

7AZO|1|23SB|C|893
7AZO|1|23SB|G|894
7AZO|1|23SB|C|895
7AZO|1|23SB|U|896
7AZO|1|23SB|G|897
7AZO|1|23SB|A|898
7AZO|1|23SB|C|899
*
7AZO|1|23SB|G|975
7AZO|1|23SB|G|976
7AZO|1|23SB|U|977
7AZO|1|23SB|G|978
7AZO|1|23SB|G|979
7AZO|1|23SB|A|980
7AZO|1|23SB|G|981

Current chains

Chain 23SB

23S rRNA

Nearby chains

Chain L30B

50S ribosomal protein L30