IL_7AZS_110
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GAUG*CUAAUC
- Length
- 10 nucleotides
- Bulged bases
- 7AZS|1|16SB|U|1884, 7AZS|1|16SB|U|1905, 7AZS|1|16SB|A|1907
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7AZS_110 not in the Motif Atlas
- Homologous match to IL_6CZR_161
- Geometric discrepancy: 0.3579
- The information below is about IL_6CZR_161
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.1
- Basepair signature
- cWW-cSS-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
7AZS|1|16SB|G|1882
7AZS|1|16SB|A|1883
7AZS|1|16SB|U|1884
7AZS|1|16SB|G|1885
*
7AZS|1|16SB|C|1904
7AZS|1|16SB|U|1905
7AZS|1|16SB|A|1906
7AZS|1|16SB|A|1907
7AZS|1|16SB|U|1908
7AZS|1|16SB|C|1909
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain S10B
- 30S ribosomal protein S10
- Chain S14B
- 30S ribosomal protein S14 type Z
- Chain S3B
- 30S ribosomal protein S3
- Chain S9B
- 30S ribosomal protein S9
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