IL_7AZY_042

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

GUUCCG*UGAC

Length

10 nucleotides

Bulged bases

7AZY|1|E|C|1016, 7AZY|1|E|C|1017

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7AZY_042 not in the Motif Atlas

Homologous match to IL_5TBW_043

Geometric discrepancy: 0.2714

The information below is about IL_5TBW_043

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_71110.1

Basepair signature

cWW-cWW-L-R-cWW

Number of instances in this motif group

10

Unit IDs

7AZY|1|E|G|1013
7AZY|1|E|U|1014
7AZY|1|E|U|1015
7AZY|1|E|C|1016
7AZY|1|E|C|1017
7AZY|1|E|G|1018
*
7AZY|1|E|U|1034
7AZY|1|E|G|1035
7AZY|1|E|A|1036
7AZY|1|E|C|1037

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain h

60S ribosomal protein L11-B

Chain o

60S ribosomal protein L10

Chain t

60S ribosomal protein L5