IL_7B7D_109
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GAAUGUAG*UAUUAUAGC
- Length
- 17 nucleotides
- Bulged bases
- 7B7D|1|LA|U|534, 7B7D|1|LA|U|558
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_109 not in the Motif Atlas
- Homologous match to IL_5TBW_020
- Geometric discrepancy: 0.1065
- The information below is about IL_5TBW_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_07703.1
- Basepair signature
- cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7B7D|1|LA|G|531
7B7D|1|LA|A|532
7B7D|1|LA|A|533
7B7D|1|LA|U|534
7B7D|1|LA|G|535
7B7D|1|LA|U|536
7B7D|1|LA|A|537
7B7D|1|LA|G|538
*
7B7D|1|LA|U|553
7B7D|1|LA|A|554
7B7D|1|LA|U|555
7B7D|1|LA|U|556
7B7D|1|LA|A|557
7B7D|1|LA|U|558
7B7D|1|LA|A|559
7B7D|1|LA|G|560
7B7D|1|LA|C|561
Current chains
- Chain LA
- 25S rRNA
Nearby chains
- Chain LO
- 60S ribosomal protein L14-A
- Chain Lo
- 60S ribosomal protein L20-A
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