IL_7B7D_165
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CGGAAUU*GGAGAUG
- Length
- 14 nucleotides
- Bulged bases
- 7B7D|1|LA|U|1716, 7B7D|1|LA|A|1729
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_165 not in the Motif Atlas
- Homologous match to IL_5TBW_073
- Geometric discrepancy: 0.0989
- The information below is about IL_5TBW_073
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_60192.2
- Basepair signature
- cWW-tSH-tSH-tSS-tHS-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
7B7D|1|LA|C|1711
7B7D|1|LA|G|1712
7B7D|1|LA|G|1713
7B7D|1|LA|A|1714
7B7D|1|LA|A|1715
7B7D|1|LA|U|1716
7B7D|1|LA|U|1717
*
7B7D|1|LA|G|1727
7B7D|1|LA|G|1728
7B7D|1|LA|A|1729
7B7D|1|LA|G|1730
7B7D|1|LA|A|1731
7B7D|1|LA|U|1732
7B7D|1|LA|G|1733
Current chains
- Chain LA
- 25S rRNA
Nearby chains
- Chain LV
- 60S ribosomal protein L27-A
- Chain LY
- 60S ribosomal protein L30
- Chain Lc
- 60S ribosomal protein L34-A
- Chain Ll
- 60S ribosomal protein L43-A
- Chain Ln
- 60S ribosomal protein L19-A
- Chain Y
- 40S ribosomal protein S13
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