IL_7B7D_193
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CAU*AGUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7B7D_193 not in the Motif Atlas
- Geometric match to IL_5TBW_099
- Geometric discrepancy: 0.1367
- The information below is about IL_5TBW_099
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_71241.2
- Basepair signature
- cWW-cWW-tSH-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
7B7D|1|LA|C|2666
7B7D|1|LA|A|2667
7B7D|1|LA|U|2668
*
7B7D|1|LA|A|2686
7B7D|1|LA|G|2687
7B7D|1|LA|U|2688
7B7D|1|LA|A|2689
7B7D|1|LA|G|2690
Current chains
- Chain LA
- 25S rRNA
Nearby chains
- Chain LB
- 5S ribosomal RNA; 5S rRNA
- Chain LG
- 60S ribosomal protein L5
- Chain LM
- 60S ribosomal protein L11-B
- Chain Lp
- 60S ribosomal protein L21-A
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