IL_7BGE_016
3D structure
- PDB id
- 7BGE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (head only)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UACAAAG*CAUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 7BGE|1|a|U|1297
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7BGE_016 not in the Motif Atlas
- Homologous match to IL_4LFB_051
- Geometric discrepancy: 0.3008
- The information below is about IL_4LFB_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12056.1
- Basepair signature
- cWW-L-R-R-bif-cWW
- Number of instances in this motif group
- 2
Unit IDs
7BGE|1|a|U|1258
7BGE|1|a|A|1259
7BGE|1|a|C|1260
7BGE|1|a|A|1261
7BGE|1|a|A|1262
7BGE|1|a|A|1263
7BGE|1|a|G|1264
*
7BGE|1|a|C|1295
7BGE|1|a|A|1296
7BGE|1|a|U|1297
7BGE|1|a|A|1298
7BGE|1|a|A|1299
7BGE|1|a|A|1300
7BGE|1|a|G|1301
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14 type Z
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