IL_7BHP_008

3D structure

PDB id

7BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human Ebp1 - 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGAAU*ACAUGUG

Length

12 nucleotides

Bulged bases

7BHP|1|L5|G|119, 7BHP|1|L5|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BHP|1|L5|C|118
7BHP|1|L5|G|119
7BHP|1|L5|A|120
7BHP|1|L5|A|121
7BHP|1|L5|U|122
*
7BHP|1|L5|A|147
7BHP|1|L5|C|148
7BHP|1|L5|A|149
7BHP|1|L5|U|150
7BHP|1|L5|G|151
7BHP|1|L5|U|152
7BHP|1|L5|G|153

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LG

60S ribosomal protein L7a

Chain LN

60S ribosomal protein L15

Chain Lh

60S ribosomal protein L35