IL_7BOD_045
3D structure
- PDB id
- 7BOD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacterial 30S ribosomal subunit assembly complex state M (body domain)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.88 Å
Loop
- Sequence
- AAGAAG*CCACU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7BOD_045 not in the Motif Atlas
- Homologous match to IL_5J7L_063
- Geometric discrepancy: 0.139
- The information below is about IL_5J7L_063
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_80231.1
- Basepair signature
- cWW-L-R-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
7BOD|1|A|A|1430
7BOD|1|A|A|1431
7BOD|1|A|G|1432
7BOD|1|A|A|1433
7BOD|1|A|A|1434
7BOD|1|A|G|1435
*
7BOD|1|A|C|1466
7BOD|1|A|C|1467
7BOD|1|A|A|1468
7BOD|1|A|C|1469
7BOD|1|A|U|1470
Current chains
- Chain A
- 16S rRNA (body domain of 30S subunit)
Nearby chains
- Chain T
- 30S ribosomal protein S20
Coloring options: