IL_7CPU_119
3D structure
- PDB id
- 7CPU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 80S ribosome from mouse kidney
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GACC*GC
- Length
- 6 nucleotides
- Bulged bases
- 7CPU|1|L5|C|4002
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7CPU_119 not in the Motif Atlas
- Geometric match to IL_5J7L_032
- Geometric discrepancy: 0.2147
- The information below is about IL_5J7L_032
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_26793.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 16
Unit IDs
7CPU|1|L5|G|4000
7CPU|1|L5|A|4001
7CPU|1|L5|C|4002
7CPU|1|L5|C|4003
*
7CPU|1|L5|G|4017
7CPU|1|L5|C|4018
Current chains
- Chain L5
- Mus musculus 28S ribosomal RNA
Nearby chains
- Chain LL
- 60S ribosomal protein L13
- Chain LQ
- 60S ribosomal protein L18
- Chain La
- 60S ribosomal protein L27a
- Chain Lo
- 60S ribosomal protein L36a
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