IL_7D63_030
3D structure
- PDB id
- 7D63 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 90S preribosome with inactive Utp24 (state C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.3 Å
Loop
- Sequence
- CCAAU*AG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7D63_030 not in the Motif Atlas
- Geometric match to IL_5J7L_018
- Geometric discrepancy: 0.1372
- The information below is about IL_5J7L_018
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_03109.3
- Basepair signature
- cWW-cWS-tWH-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
7D63|1|SA|C|443
7D63|1|SA|C|444
7D63|1|SA|A|445
7D63|1|SA|A|446
7D63|1|SA|U|447
*
7D63|1|SA|A|460
7D63|1|SA|G|461
Current chains
- Chain SA
- 18S rRNA
Nearby chains
- Chain RB
- U3 small nucleolar ribonucleoprotein protein LCP5
- Chain SF
- 40S ribosomal protein S4-A
- Chain SZ
- 40S ribosomal protein S24-A
Coloring options: