IL_7D63_073
3D structure
- PDB id
- 7D63 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 90S preribosome with inactive Utp24 (state C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.3 Å
Loop
- Sequence
- UUA*UUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7D63_073 not in the Motif Atlas
- Homologous match to IL_8C3A_477
- Geometric discrepancy: 0.5401
- The information below is about IL_8C3A_477
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_10289.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 237
Unit IDs
7D63|1|SA|U|1665
7D63|1|SA|U|1666
7D63|1|SA|A|1667
*
7D63|1|SA|U|1734
7D63|1|SA|U|1735
7D63|1|SA|G|1736
Current chains
- Chain SA
- 18S rRNA
Nearby chains
No other chains within 10ÅColoring options: