IL_7D80_089
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- UGUUC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 7D80|1|A|U|2689, 7D80|1|A|U|2690
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7D80_089 not in the Motif Atlas
- Homologous match to IL_7RQB_105
- Geometric discrepancy: 0.1756
- The information below is about IL_7RQB_105
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_08296.3
- Basepair signature
- cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
7D80|1|A|U|2687
7D80|1|A|G|2688
7D80|1|A|U|2689
7D80|1|A|U|2690
7D80|1|A|C|2691
*
7D80|1|A|G|2718
7D80|1|A|G|2719
7D80|1|A|U|2720
7D80|1|A|A|2721
7D80|1|A|G|2722
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain c
- 50S ribosomal protein L3
- Chain m
- 50S ribosomal protein L17
- Chain o
- 50S ribosomal protein L19
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