IL_7D80_132
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- GG*UCAUC
- Length
- 7 nucleotides
- Bulged bases
- 7D80|1|B|C|1200, 7D80|1|B|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7D80_132 not in the Motif Atlas
- Homologous match to IL_5J7L_048
- Geometric discrepancy: 0.1531
- The information below is about IL_5J7L_048
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_95583.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
7D80|1|B|G|1057
7D80|1|B|G|1058
*
7D80|1|B|U|1199
7D80|1|B|C|1200
7D80|1|B|A|1201
7D80|1|B|U|1202
7D80|1|B|C|1203
Current chains
- Chain B
- 16S ribosomal RNA
Nearby chains
- Chain D
- 30S ribosomal protein S3
- Chain K
- 30S ribosomal protein S10
- Chain O
- 30S ribosomal protein S14
Coloring options: