IL_7D80_144
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- CACA*UGAAG
- Length
- 9 nucleotides
- Bulged bases
- 7D80|1|B|A|1492, 7D80|1|B|A|1493
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7D80_144 not in the Motif Atlas
- Geometric match to IL_2OE8_002
- Geometric discrepancy: 0.3925
- The information below is about IL_2OE8_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_51479.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
7D80|1|B|C|1407
7D80|1|B|A|1408
7D80|1|B|C|1409
7D80|1|B|A|1410
*
7D80|1|B|U|1490
7D80|1|B|G|1491
7D80|1|B|A|1492
7D80|1|B|A|1493
7D80|1|B|G|1494
Current chains
- Chain B
- 16S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain M
- 30S ribosomal protein S12
- Chain Z
- Transfer RNA; tRNA
Coloring options: