IL_7D80_158
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- GGUAAG*CGUUAUAACC
- Length
- 16 nucleotides
- Bulged bases
- 7D80|1|A|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7D80_158 not in the Motif Atlas
- Geometric match to IL_4LFB_031
- Geometric discrepancy: 0.3856
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
7D80|1|A|G|80
7D80|1|A|G|81
7D80|1|A|U|82
7D80|1|A|A|83
7D80|1|A|A|84
7D80|1|A|G|85
*
7D80|1|A|C|97
7D80|1|A|G|98
7D80|1|A|U|99
7D80|1|A|U|100
7D80|1|A|A|101
7D80|1|A|U|102
7D80|1|A|A|103
7D80|1|A|A|104
7D80|1|A|C|105
7D80|1|A|C|106
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain s
- 50S ribosomal protein L24
- Chain w
- 50S ribosomal protein L29
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