IL_7F5S_151
3D structure
- PDB id
- 7F5S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human delta-METTL18 60S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.72 Å
Loop
- Sequence
- C(UR3)CAGUAC*GGAACCG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: UR3
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7F5S_151 not in the Motif Atlas
- Homologous match to IL_8C3A_125
- Geometric discrepancy: 0.0725
- The information below is about IL_8C3A_125
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.8
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7F5S|1|L5|C|4596
7F5S|1|L5|UR3|4597
7F5S|1|L5|C|4598
7F5S|1|L5|A|4599
7F5S|1|L5|G|4600
7F5S|1|L5|U|4601
7F5S|1|L5|A|4602
7F5S|1|L5|C|4603
*
7F5S|1|L5|G|4608
7F5S|1|L5|G|4609
7F5S|1|L5|A|4610
7F5S|1|L5|A|4611
7F5S|1|L5|C|4612
7F5S|1|L5|C|4613
7F5S|1|L5|G|4614
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain LH
- 60S ribosomal protein L9
- Chain LV
- 60S ribosomal protein L23
- Chain Lm
- Ubiquitin-60S ribosomal protein L40
Coloring options: