IL_7JQB_007
3D structure
- PDB id
- 7JQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SARS-CoV-2 Nsp1 and rabbit 40S ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UACGCA*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 7JQB|1|A|C|65, 7JQB|1|A|C|67
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7JQB_007 not in the Motif Atlas
- Homologous match to IL_4V88_390
- Geometric discrepancy: 0.1806
- The information below is about IL_4V88_390
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87517.1
- Basepair signature
- cWW-L-R-L-R-tHS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7JQB|1|A|U|63
7JQB|1|A|A|64
7JQB|1|A|C|65
7JQB|1|A|G|66
7JQB|1|A|C|67
7JQB|1|A|A|68
*
7JQB|1|A|U|81
7JQB|1|A|G|82
7JQB|1|A|A|83
7JQB|1|A|A|84
7JQB|1|A|A|85
Current chains
- Chain A
- rRNA
Nearby chains
- Chain H
- eS6
- Chain Z
- 40S ribosomal protein S24
Coloring options: