IL_7JSW_145
3D structure
- PDB id
- 7JSW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGGAG*UC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7JSW_145 not in the Motif Atlas
- Homologous match to IL_4LFB_032
- Geometric discrepancy: 0.1555
- The information below is about IL_4LFB_032
- Detailed Annotation
- Left turn
- Broad Annotation
- Left turn
- Motif group
- IL_29346.2
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
7JSW|1|3|G|774
7JSW|1|3|G|775
7JSW|1|3|G|776
7JSW|1|3|A|777
7JSW|1|3|G|778
*
7JSW|1|3|U|804
7JSW|1|3|C|805
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain P
- 30S ribosomal protein S11
- Chain Z
- 30S ribosomal protein S21
- Chain b
- 50S ribosomal protein L2
Coloring options: