IL_7JT3_127
3D structure
- PDB id
- 7JT3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GG*UGACC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7JT3_127 not in the Motif Atlas
- Homologous match to IL_6CZR_125
- Geometric discrepancy: 0.1786
- The information below is about IL_6CZR_125
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_99460.1
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
7JT3|1|3|G|292
7JT3|1|3|G|293
*
7JT3|1|3|U|304
7JT3|1|3|G|305
7JT3|1|3|A|306
7JT3|1|3|C|307
7JT3|1|3|C|308
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain Q
- 30S ribosomal protein S12
- Chain U
- 30S ribosomal protein S16
Coloring options: