IL_7K50_019

3D structure

PDB id

7K50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation non-frameshifting(CCA-A) complex (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7K50_019 not in the Motif Atlas

Homologous match to IL_5J7L_263

Geometric discrepancy: 0.1489

The information below is about IL_5J7L_263

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_95716.1

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

14

Unit IDs

7K50|1|1|U|703
7K50|1|1|G|704
7K50|1|1|A|705
7K50|1|1|A|706
7K50|1|1|G|707
*
7K50|1|1|U|724
7K50|1|1|G|725
7K50|1|1|G|726
7K50|1|1|A|727
7K50|1|1|G|728

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain b

50S ribosomal protein L2